CDS

Accession Number TCMCG057C35175
gbkey CDS
Protein Id XP_018441150.1
Location join(38237365..38237586,38237674..38238062,38238151..38239168,38239261..38239471,38239547..38239787,38239887..38240009,38240149..38240263,38240347..38240691)
Gene LOC108813174
GeneID 108813174
Organism Raphanus sativus

Protein

Length 887aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018585648.1
Definition PREDICTED: protein HIRA-like isoform X2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category B
Description Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K11293        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000228        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0000790        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0003712        [VIEW IN EMBL-EBI]
GO:0003714        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006323        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006333        [VIEW IN EMBL-EBI]
GO:0006334        [VIEW IN EMBL-EBI]
GO:0006336        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030874        [VIEW IN EMBL-EBI]
GO:0030875        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031491        [VIEW IN EMBL-EBI]
GO:0031497        [VIEW IN EMBL-EBI]
GO:0031935        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033044        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034724        [VIEW IN EMBL-EBI]
GO:0034728        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044877        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060968        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065004        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071824        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1902275        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCTGGCAAGTGGGAGCTTGGACAACACCGTCCATATATGGAACATGCGCACTGGCATTTGCACTACTGTTCTCAGGGGTCACATGAGCTTGGTCAAAGGTGTTACCTGGGATCCTGTCGGCTCCTTTCTCGCTAGCCAATCTGATGACAAATCTGTCATTATTTGGCGAACTACCGATTGGAGCATGGCTCACAGAACTCTTGGTCACTGGGAAAAATCGCTGGGAACCACATTTTTCAGGCGACTTGGGTGGTCTCCTTGTGGCCACTTCATAACCACCACTCACGGGTTTCAGAAGCCGAGGCATTCTGCTCCGGTTTTAGAAAGAGGGGAATGGTCTGAATCATTTGACTTCTTAGGTCATAATGCTCCGATCGTTGTTGTGAAGTTCAATCATTCAATGTTTAAGAGAACCACCACTTCTAGCGGTGCCCAACGAGCTGTGATGAGCAATGGGAGTTCCAAATCAGTGGGCAAAGATCTTCAGCCGTACAACGTTATTGCAATAGGGAGCCAAGACCGCACTATAACCGTGTGGACAACTGCAAGTCCCCGCCCTCTTTTCGTCGCTAAGCATTTCTTTGGCCAAAGTGTTGTCGATCTATCTTGGAGTCCAGACGGATATTCACTTTTTGCATGTTCCTTAGACGGAACAGTGGCGATGATTCACTTTGAACCAAAAGAACTTGGTGTCAGGCTAACAGATACTGAGCTTGACGAATTGAAGAAGAATCGTTATGGGGATGTAAGAGGCCGGCAAGCAAACTTAGTGGAGAGCCCAGCTCAGTTATTACTCGAAACAGTCTCCACAAAGCTAGCCGGTAGTAAGAGGGCGTCTTCAGATGTTCAAGAAAACCAGGTGACAACAACGAAACCACCACCCTCTGCAAACGCGGAGAGTGCTGCAAAGAAACGTAAGTCCTCCTCCCAGGTCGATGGTAATGATCAGAATAAGACAGAAGAGGCTGATACATTGAGTAAAGCTTCAACTCCAAATCGGGTATCTAATCCCGTGAATCAGAAAGTGTATAGAAGGCCTGATGGAAGAAAGAGGATCATCCCTGAAGCCGTAGGAGTTCCCCAGCAGGAGAACAATATCTCCATTAACGAGCATTCCAGTAATTTTCCGCCAGCTCCCTCTCCTGCTCCTCCTAGTAAGATAGGTAGTAGGGACCTTCCTGCGGGGACTAGCATCAAGGACTCATCCACCGCGAAAGAGATAGCGATCATTAACAACGAGCGTCCAAGGAATACAGCTCGTGCTACCATTTCTGAGAGCCTTGTTATCGAGAAGGTTCCTGGAGCCTCTCCTAGAGATGGAGTTTTAAATGTTGAGCAATCTGTAGGTGTAAAGGGATCTTCTGCCTCTAGCACAGGTCTGTTGATAAGGGTGTTTGACTGGAAACAAGGGGAAGAAGCCACCGCCCCTGTTTGCTTAGAAGCTTGTCCAAAGGAGTACGCGTTGGACACTGTTGGTGTAGTAAGTACATCTACCGTCAAGGAAACAGAGGTTATTTGCAAAAGATCAGGTGAAACTCTTTGGTCTGATCGGATTATGGGGAGTGTCACAGTTTTGGCTGGCAATCCAAACTTTTGGGCCGTTGGGTGCGAAGATGGAAGCCTCCAGGTTTACACAAAATGTGGAAGGCGTGCGATGCCTACAATGATGATGGGATCTGCTGCAACATTCATAGATTGTGACGATAGCTGGAAACTGCTGCTTGTCACGAGAAAAGGATCGTTATACATGTGGGATCTATTCAATAGGAAATGCATCCTCCATGACTCTTTATCATCTTTGGTTTCTTCCGATACCAATTTATCGTCCACCGTACAAGGTACGATAAAAGTCATATCTGTGAAATTATCGAAGTCTGGTTCTCCACTTGTTGTTCTAGCCACACGACATGCATTCCTCTTCGATACGAGTCTAATGTGCTGGCTGAGAGTGGCTGACGACTGCTTCCCTGCCTCGAATTTCAGTAGCTCCTGGAGTTTGGGCTCAGCTCCATGCGGAGAGCTTGCTGGCTTGCAGGTTGATGTGAGAAAGTACATGGCTAGAAAGCCAGGATGGAACAGGATAGCTGATGATGGAGTGCAAACACGTGCACATTTGGAATCTCAATTTGCATCCTCTCTTGCGTTGGAGTCTCCTAACGAGTACCGCCACTGCCTCCTCGCCTATGTTAGGTTTCTAGCTAGAGAGGCAGACGAGTCAAGACTAAGAGAAGTGTGCGAGAGCTTTCTTGGACCTCCTACTGGTATGGCTGAAGCAACAACCTCAGACACAAACTTGTCTTGGGATCCATATGTTCTGGGGGTGAAGAAGCATAAACTATTGAGAAACGATATTCTTCCTGCAATGGCCTCAAACAGGAAGGTGCAGCGTCTACTCAGTGAGTTTATGGATCTGTTATCTGAATACGAAAACACAGAAGTAGCAGAAGCTGCAACTAAGGGGTCGGAACCAACCATAAACTGTAGTGGAGTCCCATCTTCACTGGATCAAATGGATTCTGATCCTCCAGCAGTGACAGCTACAACTCCTTTGACAATAGACAATGACAAACAGGTTTCTTTGGAGACGGGTGTGATGTGTGAGAAACAGGGCTCTGAAGCCCAGGAAAGGCACGACCAGAATTTAAGAGACCCGGGTGCTTGA
Protein:  
MLASGSLDNTVHIWNMRTGICTTVLRGHMSLVKGVTWDPVGSFLASQSDDKSVIIWRTTDWSMAHRTLGHWEKSLGTTFFRRLGWSPCGHFITTTHGFQKPRHSAPVLERGEWSESFDFLGHNAPIVVVKFNHSMFKRTTTSSGAQRAVMSNGSSKSVGKDLQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFGQSVVDLSWSPDGYSLFACSLDGTVAMIHFEPKELGVRLTDTELDELKKNRYGDVRGRQANLVESPAQLLLETVSTKLAGSKRASSDVQENQVTTTKPPPSANAESAAKKRKSSSQVDGNDQNKTEEADTLSKASTPNRVSNPVNQKVYRRPDGRKRIIPEAVGVPQQENNISINEHSSNFPPAPSPAPPSKIGSRDLPAGTSIKDSSTAKEIAIINNERPRNTARATISESLVIEKVPGASPRDGVLNVEQSVGVKGSSASSTGLLIRVFDWKQGEEATAPVCLEACPKEYALDTVGVVSTSTVKETEVICKRSGETLWSDRIMGSVTVLAGNPNFWAVGCEDGSLQVYTKCGRRAMPTMMMGSAATFIDCDDSWKLLLVTRKGSLYMWDLFNRKCILHDSLSSLVSSDTNLSSTVQGTIKVISVKLSKSGSPLVVLATRHAFLFDTSLMCWLRVADDCFPASNFSSSWSLGSAPCGELAGLQVDVRKYMARKPGWNRIADDGVQTRAHLESQFASSLALESPNEYRHCLLAYVRFLAREADESRLREVCESFLGPPTGMAEATTSDTNLSWDPYVLGVKKHKLLRNDILPAMASNRKVQRLLSEFMDLLSEYENTEVAEAATKGSEPTINCSGVPSSLDQMDSDPPAVTATTPLTIDNDKQVSLETGVMCEKQGSEAQERHDQNLRDPGA